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The protein structure alignment is calculated on the following chains: 2d9h:A; 2adr:A; 4gzn:C; 1x6e:A; 2cot:A; 2drp:A(110-135, in grey);

After structure superposition, other chains that are added to the superimposed structures are: 4gzn:A,B; 2drp:B,C.

Protein structure alignment in short-format (display amino acids in the alignment only):

  /2drpABC.pdb/ /A/  110 
 TYRCKVCSRVYTHISNFCRHYVTSHK
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /2d9hA.pdb/ /A/   38 
 RFPCEFCGKRFEKPDSVAAHRSKSHP
  26                  0.89  19.23       38.46         2.96e-07 

  /2drpABC.pdb/ /A/  110 
 TYRCKVCSRVYTHISNFCRHYVTSHK
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /2adrA.pdb/ /A/  131 
 PYPCGLCNRAFTRRDLLIRHAQKIHS
  26                  0.78  30.77       42.31         8.81e-11 

  /2drpABC.pdb/ /A/  110 
 TYRCKVCSRVYTHISNFCRHYVTSHK
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
  /4gznCAB.pdb/ /C/  139 
 PFFCNFCGKTYRDASGLSRHRRAHLG
  26                  1.28  23.08       30.77         1.53e-08 

  /2drpABC.pdb/ /A/  110 
 TYRCKVCSRVYTHISNFCRHYVTSHK
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /1x6eA.pdb/ /A/   14 
 PYGCVECGKAFSRSSILVQHQRVHTG
  26                  1.56  19.23       34.62         7.97e-06 

  /2drpABC.pdb/ /A/  110 
 TYRCKVCSRVYTHISNFCRHYVTSHK
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /2cotA.pdb/ /A/   18 
 RYKCDECGKSFSHSSDLSKHRRTHTG
  26                  1.67  26.92       50.00         4.40e-05 

Protein structure alignment in long-format (display gapped full length protein):

  /2drpABC.pdb/ /A/  103 
 ftkegeh-------------------------------------TYRCKVCSRVYTHISNFCRHYVTSHKrnvkvypcpfcfkeftrkdnmtahvkiihkxx---------------
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /2d9hA.pdb/ /A/    1 
 -------gssgssglqceicgftcrqkaslnwhqrkhaetvaalRFPCEFCGKRFEKPDSVAAHRSKSHP--------------------------------alllapqessgpssg
  26                  0.89  19.23       38.46         2.96e-07 

  /2drpABC.pdb/ /A/  103 
 ftkegeh-----------------------------TYRCKVCSRVYTHISNFCRHYVTSHKrnvkvypcpfcfkeftrkdnmtahvkiihkxx-----
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /2adrA.pdb/ /A/  102 
 -------rsfvcevctrafarqehlkrhyrshtnekPYPCGLCNRAFTRRDLLIRHAQKIHS--------------------------------gnlge
  26                  0.78  30.77       42.31         8.81e-11 

  /2drpABC.pdb/ /A/  103 
 ftkegeh---TYRCKVCSRVYTHISNFCRHYVTSHKrnvkvypcpfcfkeftrkdnmtahvkiihkxx-----------------------------------
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
  /4gznCAB.pdb/ /C/  136 
 -------serPFFCNFCGKTYRDASGLSRHRRAHLG--------------------------------yrprscpecgkcfrdqsevnrhlkvhqnkpxxxxx
  26                  1.28  23.08       30.77         1.53e-08 

  /2drpABC.pdb/ /A/  103 
 ftkegeh-------------TYRCKVCSRVYTHISNFCRHYVTSHKrnvkvypcpfcfkeftrkdnmtahvkiihkxx---------------------------------
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /1x6eA.pdb/ /A/    1 
 -------gssgssgihsgekPYGCVECGKAFSRSSILVQHQRVHTG--------------------------------ekpykclecgkafsqnsglinhqrihtsgpssg
  26                  1.56  19.23       34.62         7.97e-06 

  /2drpABC.pdb/ /A/  103 
 ftkegeh-----------------TYRCKVCSRVYTHISNFCRHYVTSHKrnvkvypcpfcfkeftrkdnmtahvkiihkxx----------------------------------
  Equivalent-residues RMSD  Identity(%) Similarity(%) P-value  
    /2cotA.pdb/ /A/    1 
 -------gssgssgrsewqqrerrRYKCDECGKSFSHSSDLSKHRRTHTG--------------------------------ekpykcdecgkafiqrshlighhrvhtgsgpssg
  26                  1.67  26.92       50.00         4.40e-05 

ColorPDBAligned Chain/SegmentsOther ChainsShow Ligands

Download a UCSF Chimera script for publication ready visualization and multiple analysis tools here. Start chimera and use "Open" menu to open the downloaded script. Please note, you must have access to the internet to download the aligned structures.
zincFingerSegRef.pdb
2d9hA.pdb   
2adrA.pdb   
4gznCAB.pdb   
1x6eA.pdb   
2cotA.pdb   
2drpABC.pdb   
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